Closed DarioS closed 3 years ago
It should be 1.0.0a to avoid the defective version being used.
https://github.com/Sydney-Informatics-Hub/Germline-ShortV/blob/022697fa6900cb7accebe22698e43387c96386ad/gatk4_hc_run_parallel.pbs#L48
Also, is module load openmpi/4.1.0 necessary alongside this? I can't remember exactly what Ben Menadue said.
module load openmpi/4.1.0
Fixed
tracychew
commented
3 years ago tracychew
commented
3 years ago
It should be 1.0.0a to avoid the defective version being used.
https://github.com/Sydney-Informatics-Hub/Germline-ShortV/blob/022697fa6900cb7accebe22698e43387c96386ad/gatk4_hc_run_parallel.pbs#L48
Also, is
module load openmpi/4.1.0necessary alongside this? I can't remember exactly what Ben Menadue said.