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Sydney-Informatics-Hub / Germline-StructuralV-nf

Germline structural variant calling pipeline for short read WGS datasets
GNU General Public License v3.0
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Add CNV module #35

Closed georgiesamaha closed 1 year ago

georgiesamaha commented 1 year ago

Following feedback on validation of known SV, will need to add CNV module to workflow. Exploring:

georgiesamaha commented 1 year ago

Wont do this. Elevated false positives. Look into tiddit cov plots instead.