Apply additional flags to AnnotSV

Sydney-Informatics-Hub / Germline-StructuralV-nf

Germline structural variant calling pipeline for short read WGS datasets

GNU General Public License v3.0

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Closed georgiesamaha closed 1 year ago

georgiesamaha commented 1 year ago

Add extraAnnotsvFlags parameter to specify any permitted by AnnotSV (as per documentation)
Update README with instructions on how to apply flag