Open NJNataren opened 5 months ago
Script was not creating the directory outdir=../QC_reports/${cohort}_final_bams
outdir=../QC_reports/${cohort}_final_bams
This was due to missing ${outdir} in the mkdir command, which should be mkdir -p ${INPUTS} ${outdir} ${logdir}
mkdir -p ${INPUTS} ${outdir} ${logdir}
Script was not creating the directory
outdir=../QC_reports/${cohort}_final_bamsThis was due to missing ${outdir} in the mkdir command, which should be
mkdir -p ${INPUTS} ${outdir} ${logdir}