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Sydney-Informatics-Hub / Shotgun-Metagenomics-Analysis

Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more
GNU General Public License v3.0
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Add group-level output for 'Filter ARGs by coverage and identity' #14

Closed calizilla closed 2 years ago

calizilla commented 2 years ago

Currently only all-samples R dataframes made - create script to format groups. This will be trivial if the group ID is added to the output from a few steps back, but will mess up downstream compatibility due to column order changes. Come up with an alternate method to print groups output files.

calizilla commented 2 years ago

Done. No change to data columns required.