Recent MuTect2 Versions Have Degraded Variant Calling Performance - Githubissues

Sydney-Informatics-Hub / Somatic-ShortV

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Recent MuTect2 Versions Have Degraded Variant Calling Performance #13

Open DarioS opened 2 years ago

DarioS commented 2 years ago

I notice that module load gatk/4.2.1.0 is default but I saw that variant calling accuracy is degraded since version 4.1.9.0.