molecules(me, assayName = "detected", flatten = TRUE) shows that feature_name still ends up being the column name. But it should be feature_id. This is apparent when using the ggplot_me functions:
-byFillargument still needs feature_names. Should be changed tofeature_id
Also:
geom_polygon_me should accept assay names different than "cell" as the default, or at least warn user.
molecules(me, assayName = "detected", flatten = TRUE)shows that feature_name still ends up being the column name. But it should be feature_id. This is apparent when using theggplot_mefunctions: -byFillargument still needsfeature_names. Should be changed tofeature_idAlso: