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SydneyBioX / scMerge

Statistical approach for removing unwanted variation from multiple single-cell datasets
https://sydneybiox.github.io/scMerge/
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Using BiocSingular for SVD operations #8

Closed kevinwang09 closed 1 year ago

kevinwang09 commented 5 years ago

BiocSingular is officially available in BioC 3.9 release. This package should help with managing different SVD operations.

https://bioconductor.org/packages/release/bioc/html/BiocSingular.html

This is a package that we should potentially use for consistencies.

nick-robo commented 1 year ago

@YingxinLin is this planned?

YingxinLin commented 1 year ago

It is implemented in scMerge2 now.