getPairwise Function Returns Zero-column Matrix

SydneyBioX / spicyR

https://sydneybiox.github.io/spicyR/

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getPairwise Function Returns Zero-column Matrix #43

Closed DarioS closed 1 month ago

DarioS commented 2 months ago

For example,

library(spicyR)
load("/dski/nobackup/biostat/test/IMC.RData") # albona.
pairsColocated <- getPairwise(IMC, sigma = 50, imageID = "ImageNumber", cellType = "description",
                              spatialCoordCols = c("Location_Center_X", "Location_Center_Y"))
> dim(pairsColocated)
  385   0

nick-robo commented 1 month ago

This should be fixed