Update README.md for sbol3 - Githubissues

SynBioDex / SBOL-specification

The Synthetic Biology Open Language (SBOL)

http://sbolstandard.org

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Update README.md for sbol3 #396

Closed tcmitchell closed 3 years ago

tcmitchell commented 3 years ago

In the section "Building the PDF from LateX" the commands should use sbol3 instead of sbol2.
Building with the jmcl/specbuild docker image does not work:
- It results in /bin/sh: ./compile: Permission denied because compile is not executable
- ./compile sbol2 is hardcoded in the docker image so making compile executable still results in failure

The spec can be built via the jmcl/specbuild by following this recipe:

$ docker run -it --entrypoint=/bin/bash -v $(pwd):/opt/spec jmcl/specbuild
bash-4.4# cd /opt/spec
bash-4.4# pdflatex sbol3
    (lots of output)
bash-4.4# bibtex sbol3
    (lots of output)
bash-4.4# pdflatex sbol3
    (lots of output)
bash-4.4# pdflatex sbol3
    (lots of output)

# built document resides in sbol3.pdf