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SynBioDex
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tyto
Use ontology terms in your Python application
Apache License 2.0
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Update EBI Ontology Lookup Service endpoints
#81
bbartley
opened
5 months ago
0
EBI ontology lookup service endpoints have migrated
#80
bbartley
closed
5 months ago
3
SO lookups fail on python 3.11
#79
PiotrZakrzewski
closed
5 months ago
1
Workflow needs updating
#78
jakebeal
opened
1 year ago
0
is_a does not work with NamedIndividuals
#77
bbartley
opened
1 year ago
0
get_instances() should return tyto.URI
#76
bbartley
opened
1 year ago
0
Normalize function
#75
jakebeal
opened
1 year ago
8
get_instances() should return empty list instead of Exception
#74
bbartley
opened
1 year ago
0
Deprecate CI build on Python 3.6
#73
bbartley
closed
1 year ago
0
71 fix term
#72
bbartley
closed
1 year ago
0
tyto 1.2.2 and tyto 1.3 cause sbol-utilities tests to be slow and fail
#71
jakebeal
closed
1 year ago
1
tyto 1.2.2, 1.3 are not tagged / released properly
#70
jakebeal
closed
1 year ago
1
Add method to query for instances
#69
bbartley
closed
1 year ago
0
Access to ambiguous terms
#68
jakebeal
opened
2 years ago
0
PAML Protocol vs. protocol
#67
bbartley
opened
2 years ago
0
Fix #65 by adding a case-sensitive fallback
#66
jakebeal
closed
2 years ago
0
OWL node-ids contaminating SO query results
#65
jakebeal
closed
2 years ago
3
change test matrix to not hard-wire ubuntu
#64
jakebeal
closed
2 years ago
0
Support PAML
#63
bbartley
closed
2 years ago
0
Feature support pubchem
#62
bbartley
closed
2 years ago
0
`get_ontologies` drops one of the hosted ontologies
#61
bbartley
closed
2 years ago
0
Remove GNO
#60
bbartley
closed
2 years ago
0
Test breaks because Ontobee stopped supporting GNO
#59
bbartley
closed
2 years ago
0
Add a nightly build for Tyto
#58
jakebeal
closed
2 years ago
1
Add ACS SynBio citation
#57
jakebeal
closed
2 years ago
2
Add Support for Design-Build-Test-Learn Terms in SBOL3 Ontology
#56
nroehner
opened
2 years ago
0
Add Support to Tyto for SBOL3 Constraint Restrictions
#55
nroehner
opened
2 years ago
1
37 sbol support
#54
bbartley
closed
2 years ago
0
Update docs
#53
bbartley
closed
2 years ago
0
34 term to variable
#52
bbartley
closed
2 years ago
0
Tyto seems to stick
#51
JMante1
closed
2 years ago
8
42 list ontologies
#50
bbartley
closed
2 years ago
0
Throw exception when a nonunique label is found
#49
bbartley
closed
2 years ago
0
Support lookup of terms using Ontology subscripts
#48
bbartley
closed
2 years ago
0
Handle non-unique rdfs:labels
#47
bbartley
closed
2 years ago
0
Allow relation checks via ontology object
#46
jakebeal
opened
2 years ago
1
Provide autocomplete on ontology objects
#45
matthiaskoenig
opened
2 years ago
0
Resolve #41
#44
bbartley
closed
2 years ago
0
Add is_a method to URI class
#43
bbartley
closed
2 years ago
0
List ontologies for a given endpoint
#42
bbartley
closed
2 years ago
0
Dynamic attributes should assume underscores should be replaced with spaces when looking up terms
#41
bbartley
closed
2 years ago
0
Document identifiers.org URLs
#40
bbartley
closed
2 years ago
0
Tyto Calls Not via attributes
#39
JMante1
closed
2 years ago
7
Offline mode
#38
jakebeal
opened
2 years ago
2
Make sure all SBOL ontologies are supported
#37
jakebeal
closed
2 years ago
1
Improve documentation
#36
jakebeal
closed
2 years ago
3
Include synonyms
#35
jakebeal
opened
2 years ago
3
From term to variable?
#34
jakebeal
closed
2 years ago
2
Fast test for URI containment
#33
jakebeal
opened
2 years ago
0
Accelerate inference queries
#32
jakebeal
opened
2 years ago
1
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