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CellFactory-ecYeastGEM
Code and data for in silico strain design for enhanced production of +100 typical bio-products with yeast as a cell-factory. Predictions are based on the ecYeastGEM model avaiable at ecModels.
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Feat/call external ec factory
#31
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IVANDOMENZAIN
closed
1 year ago
IVANDOMENZAIN
commented
1 year ago
Main improvements:
standardize chemical name IDs 42971ff47b088edf28bc39056f7b667c65660396 and ddf44b15025a40c162500fa8c31d2a0c5c9c0b12
Add analysis of production capabilities 6e066fdc7ad3847cbc783d85805aa2806e8fdd06 and 8cd3f1e1e185f77a3c5cd3fed6abe9d0533584f9
Update the ecFactory method, which is now cloned from an external dynamic repository: 96426e9a26c676d6df95e55d7a663ab5ccc819c0
Update some analysis scripts (in R)
Remove deprecated functions
Update results
Main improvements: