Closed mihai-sysbio closed 1 year ago
This PR has been automatically tested with GH Actions. Here is the output of the tests:
Running geckoCoreFunctionTests
Done geckoCoreFunctionTests
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Note: In the case of multiple test runs, this post will be edited.
It takes less than 10 min to run the light tutorial now, great job 🌟 (I know it's using a lot of pre-computed values in the TSV files, but we do provide ways to reproduce them directly in the tutorial)
The order of installing GECKO and checking the RAVEN installation is different in the 2 tutorials. Any insight into which is preferred?
In STEP 22 of the full tutorial
sol = solveLP(ecModel)
prints a growth rate of 0.0887, which very close to 0.0889 but still different. Any reactions?
I've ran both tutorials several times in less than 1 hour in total, very convenient 🤩
The order of installing GECKO and checking the RAVEN installation is different in the 2 tutorials. Any insight into which is preferred?
Best to have RAVEN first, as GECKO will do a check that RAVEN can be found, I'll swap it.
In STEP 22 of the full tutorial
sol = solveLP(ecModel)
prints a growth rate of 0.0887, which very close to 0.0889 but still different. Any reactions?
I'll slightly rephrase it to avoid mentioning precise numbers.
Main improvements in this PR:
This PR is used to highlight a few places where the tutorials can be further improved/simplified. Please feel free to push commits to this branch.
I hereby confirm that I have:
develop
as a target branch (top left drop-down menu)