Open JHL-452b opened 1 month ago
For Leukotriene metabolism
, I continued to add 3 unrelated gene-reaction pairs discoverd by GPT.
Gene | UniProtID | Reaction | GPR | Correlation | Check |
---|---|---|---|---|---|
ENSG00000203972 | Q5SZD4 | MAR01088: CoA + H+ + N-acetyl-LTE4 <=> acetyl-CoA + leukotriene E4 | ENSG00000023041 or ENSG00000054392 or ENSG00000087253 or ENSG00000090971 or ENSG00000097033 or ENSG00000099904 or ENSG00000100344 or ENSG00000102030 or ENSG00000102312 or ENSG00000102383 or ENSG00000103066 or ENSG00000104219 or ENSG00000106636 or ENSG00000109065 or ENSG00000110583 or ENSG00000111684 or ENSG00000121579 or ENSG00000122390 or ENSG00000123684 or ENSG00000125505 or ENSG00000133328 or ENSG00000135372 or ENSG00000136247 or ENSG00000141446 or ENSG00000143797 or ENSG00000144035 or ENSG00000153395 or ENSG00000153786 or ENSG00000156599 or ENSG00000159714 or ENSG00000160446 or ENSG00000163812 or ENSG00000163958 or ENSG00000167011 or ENSG00000171307 or ENSG00000171320 or ENSG00000172197 or ENSG00000172954 or ENSG00000173418 or ENSG00000174165 or ENSG00000175048 or ENSG00000175893 or ENSG00000176454 or ENSG00000177054 or ENSG00000177108 or ENSG00000177669 or ENSG00000180776 or ENSG00000184210 or ENSG00000184307 or ENSG00000184788 or ENSG00000186908 or ENSG00000188706 or ENSG00000188818 or ENSG00000203972 or ENSG00000204160 or ENSG00000206077 or ENSG00000243477 | Pending No, the gene is not relevant to the reaction provided. Analysis and explanation: The gene ENSG00000203972 encodes a protein that catalyzes the conjugation of long-chain fatty acyl-CoA thioesters and glycine to produce long-chain N-(fatty acyl)glycine, which is an intermediate in the primary fatty acid amide biosynthetic pathway. The provided reaction, however, involves the conversion of CoA, H+, and N-acetyl-LTE4 to acetyl-CoA and leukotriene E4, which does not appear to involve long-chain fatty acyl-CoA thioesters or glycine, nor does it fit within the described functional activity of the gene product. The reaction also does not align with the specific catalytic activities (e.g., producing N-(9Z-octadecenoyl)glycine or N-hexadecanoylglycine) detailed for this gene. Hence, the gene is not relevant to the reaction provided. | No |
ENSG00000159228 | P16152 | MAR01101: leukotriene B4 + NAD+ --> 12-keto-LTB4 + H+ + NADH | ENSG00000157326 or ENSG00000159228 or ENSG00000159231 | Pending No, the gene is not relevant to the reaction provided. Analysis and explanation: The gene ENSG00000159228 encodes an NADPH-dependent reductase that catalyzes the reduction of various carbonyl compounds including quinones, prostaglandins, menadione, xenobiotics, and antitumor anthracyclines. It is involved in cortisol/corticosterone metabolism and S-nitrosoglutathione reduction. However, the provided reaction involves the oxidation of leukotriene B4 using NAD+, resulting in 12-keto-LTB4, H+, and NADH. This reaction does not match the catalytic activities of the enzyme encoded by the gene, which predominantly uses NADP+/NADPH as coenzymes. Therefore, the gene is not relevant to the reaction provided. | No |
ENSG00000138109 | P11712 | MAR01196: 5-oxo-(6E)-12-epi-LTB4 + H+ + NADPH <=> 6,7-dihydro-5-oxo-12-epi-LTB4 + NADP+ | ENSG00000021461 or ENSG00000100197 or ENSG00000106258 or ENSG00000108242 or ENSG00000130649 or ENSG00000134716 or ENSG00000137869 or ENSG00000138061 or ENSG00000138109 or ENSG00000138115 or ENSG00000140465 or ENSG00000140505 or ENSG00000142973 or ENSG00000155016 or ENSG00000160868 or ENSG00000160870 or ENSG00000165841 or ENSG00000167600 or ENSG00000171903 or ENSG00000186160 or ENSG00000186204 or ENSG00000186377 or ENSG00000186526 or ENSG00000197408 or ENSG00000197446 or ENSG00000197838 or ENSG00000198077 or ENSG00000255974 | Pending No, the gene is not relevant to the reaction provided. Analysis and explanation. The gene ENSG00000138109 encodes a cytochrome P450 monooxygenase involved in various metabolic processes, including the metabolism of fatty acids, steroids, cholesterol, and drugs by inserting oxygen atoms into substrates. It is associated with reactions involving the epoxidation of polyunsaturated fatty acids, hydroxylation of carbon-hydrogen bonds, and metabolism of cholesterol to 25-hydroxycholesterol, among others. However, the given reaction involves the conversion of 5-oxo-(6E)-12-epi-LTB4 to 6,7-dihydro-5-oxo-12-epi-LTB4 using NADPH, which does not involve the monooxygenase function or any of the described catalytic activities of the gene ENSG00000138109. Therefore, the gene and the reaction are not related. | No |
LGTM!
Current behavior:
19 genes are discovered to be uncorrelated with their corresponding reactions in
Leukotriene metabolism
.