By combining the S288c yeast-GEM and non-S288c specific submodels, a pan-genome yeast GEM can be generated.
[ ] write Matlab script that combines both submodels to generate one panYeast-GEM
[ ] write Matlab script that adjusts grRules of yeast-GEM-derived pan-submodel, to include potential novel panIDs that were not automatically annotated by converting yeast-GEM to a pan-genome submodel (this is because non-S288c panIDs might be annotated to existing S288c-derived reactions)
By combining the S288c
yeast-GEMand non-S288c specific submodels, a pan-genome yeast GEM can be generated.yeast-GEM-derived pan-submodel, to include potential novel panIDs that were not automatically annotated by convertingyeast-GEMto a pan-genome submodel (this is because non-S288c panIDs might be annotated to existing S288c-derived reactions)