SystemsGenetics / BioDepVis

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Bdv with qt #21

Closed bentsherman closed 7 years ago

feltus commented 7 years ago

Holy cow!

Sent from my Verizon, Samsung Galaxy smartphone -------- Original message --------From: Ben Shealy notifications@github.com Date: 9/28/17 3:49 PM (GMT-05:00) To: feltus/BioDep-Vis BioDep-Vis@noreply.github.com Cc: Subscribed subscribed@noreply.github.com Subject: [feltus/BioDep-Vis] Bdv with qt (#21)

You can view, comment on, or merge this pull request online at:   https://github.com/feltus/BioDep-Vis/pull/21

Commit Summary

Added Qt Files Added Command Line Code and files for graph and alignment Filled in some of the graph and alignment files, still errors to sift through... Cleaned up code, combined some globals into Database class Added Ont.cpp back from master Removed ont_data.txt, changed code to use go-basic.obo instead Ontology File Changes Load_dataset added to graph and compiles Updates to Graph Class function load_ontology, some errors present Updates to Graph Class function load_ontology Added code to populated connected nodes, added print methods Cleaned up code, formatting Cleaned up variable names Added edge matrix, edge list to Alignment class Worked on print statements throughout code Refactored Graph code to load cluster file first Added coords and edge list to Graph Added update method to Alignment Worked on logging code Added initial OpenGL widget Added gl code from init() to initializeGL() added function defs to Visualizer class Added code from PerspDisplay, drawGraph, drawAlignment Refactored some Graph code Renamed VisualizerWidget to Visualizer Added node colors to Graph Changed Database to use Alignment pointers Added function comments to Graph and Alignment Added edge colors to Visualizer

File Changes

M
.gitignore
(3)

A
Qt/BioDepVis.pro
(44)

A
Qt/BioDepVis.pro.user
(337)

A
Qt/alignment.cpp
(103)

A
Qt/alignment.h
(37)

A
Qt/database.cpp
(144)

A
Qt/database.h
(37)

A
Qt/graph.cpp
(240)

A
Qt/graph.h
(84)

A
Qt/main.cpp
(94)

A
Qt/mainwindow.cpp
(173)

A
Qt/mainwindow.h
(24)

A
Qt/mainwindow.ui
(24)

A
Qt/visualizer.cpp
(220)

A
Qt/visualizer.h
(32)

M
README.md
(2)

D
ont_data.txt
(535441)

M
src/Ont.cpp
(4)

M
src/graph.cpp
(21)

M
src/util.cpp
(44)

Patch Links:

https://github.com/feltus/BioDep-Vis/pull/21.patch https://github.com/feltus/BioDep-Vis/pull/21.diff

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