Closed JohnHadish closed 2 years ago
Thanks John for all the work on this
To keep the code consistent with lots of contributors, we run automated code consistency checks. To fix this CI test, please run:
markdownlint-cli
brew install markdownlint-cli
npm
then install markdownlint-cli
(npm install -g markdownlint-cli
)markdownlint . --fix
markdownlint .
Once you push these changes the test should pass, and you can hide this comment :+1:
We highly recommend setting up markdownlint in your code editor so that this formatting is done automatically on save. Ask about it on Slack for help!
Thanks again for your contribution!
Major: Fixed STAR cleanup.
Minor: Added an Error message for Hisat2 in case user does not assign
--hisat2_base_name
during Hisat2 executionTest: Run STAR with Arabidopsis example. Should reurn work directory ~31M