SystemsGenetics / GEMmaker

A workflow for construction of Gene Expression count Matrices (GEMs). Useful for Differential Gene Expression (DGE) analysis and Gene Co-Expression Network (GCN) construction
https://gemmaker.readthedocs.io/en/latest/
MIT License
33 stars 16 forks source link

Star #254

Closed JohnHadish closed 2 years ago

JohnHadish commented 2 years ago

Major: Fixed STAR cleanup.

Minor: Added an Error message for Hisat2 in case user does not assign --hisat2_base_name during Hisat2 execution

Test: Run STAR with Arabidopsis example. Should reurn work directory ~31M

spficklin commented 2 years ago

Thanks John for all the work on this

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