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SystemsGenetics / KINC

Knowledge Independent Network Construction
MIT License
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Adds a power analysis test for the cond-test regression test #150

Closed spficklin closed 4 years ago

spficklin commented 4 years ago

If there are few quantitative data points either because of few samples or because of exact repeats of values then the regression test in the cond-test analytic may not have sufficient power. This update adds a power test after regression analysis to filter out those with significant p-values but that don't have sufficient power.

This update requires that the boost C++ libraries are installed. This instruction has been updated in the installation documentation in this PR as well.

Finally, I updated the example scripts to make it easier to compare results.

spficklin commented 4 years ago

Whoops, this PR is merging into master rather than the develop branch. @JohnHadish and @4ctrl-alt-del once you test these and approve them, I will close it and then redo it so it merge into the develop branch.

JohnHadish commented 4 years ago

Approved that code is functional, unable to verify math easily