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SystemsGenetics / KINC

Knowledge Independent Network Construction
MIT License
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Log file print line at start #187

Open JohnHadish opened 1 year ago

JohnHadish commented 1 year ago

The similarity step can take awhile depending on how large the file is. The first line the similarity step prints to the log file is when it completes 1% of the similarity correlations. This means that you will have an empty log file untill it prints the first percentage:

# cat log.log
 0: 1%  3m12s   5h16m48s
 0: 2%  5m27s   4h27m3s
 0: 3%  7m16s   3h54m57s

Request: Have KINC print a line to the log file as soon as it starts. This will show the user that the program is actually running. It is nerve racking to have a log file which has been running for 10 minutes that does not have any output in it. Suggestion Have KINC print which files it is going to use for the step it is currently on.