rtmclay
commented
1 year ago With such limited information to go on, it is hard to tell. It is helpful to include the modulefile when submitting a bug report. My best guess is that you are using source-sh script and the script wasn't found.
If you are trying to use source-sh to convert a script into a module and it doesn't work. You need to run $LMOD_DIR/sh_to_modulefile on the script with the -D option and see what stderr reports.
Hi i ahve installed lmod using yum install Lmod Here is my installed module and its version
module --version
Modules based on Lua: Version 8.7.20 2023-03-16 11:43 -05:00 by Robert McLay mclay@tacc.utexas.edu
Here is the installed directory
cd /usr/share/lmod/ [root@master lmod]# tree -L 1 . ├── 8.7.20 └── lmod -> 8.7.20
2 directories, 0 files
module avail
---------------------------------------------------------------- /usr/share/lmod/lmod/modulefiles/Core ---------------------------------------------------------------- fastqc/0.12.1 lmod settarg
If the avail list is too long consider trying:
"module --default avail" or "ml -d av" to just list the default modules. "module overview" or "ml ov" to display the number of modules for each name.
Use "module spider" to find all possible modules and extensions. Use "module keyword key1 key2 ..." to search for all possible modules matching any of the "keys".
When I was loading into Slurm files. I am getting the following error. please help me to rectify this module load fastqc/0.12.1
environment: line 17: /usr/share/lmod/lmod/libexec/lmod: No such file or directory /var/spool/slurm/slurmd/job00040/slurm_script: line 14: fastqc: command not found