Symptom: Workflow will not run.
Problem: Tools in workflow have new versions.
Solution: Workflow must be opened and saved. If the tool has had new parameters added, those must be manually set (even if they have a preset default value) the first time it is viewed in the workflow edit view. Alternatively, for published workflows, they can be re-imported.
Useful screenshots to include:
Galaxy warning messages indicating that tools have changed
Editor warnings upon the opening of a workflow with tools that have changed. The values mention here may need to be manually set prior to saving.
If error messages are ignored and the user tries to run a workflow even with errors, Galaxy may give a "Workflow failed" message similar to this, which gives the first clue as to which tools are preventing the workflow from running.
ltmaddox
commented
4 years ago
Symptom: Workflow will not run. Problem: Tools in workflow have new versions. Solution: Workflow must be opened and saved. If the tool has had new parameters added, those must be manually set (even if they have a preset default value) the first time it is viewed in the workflow edit view. Alternatively, for published workflows, they can be re-imported.
Useful screenshots to include: Galaxy warning messages indicating that tools have changed
Editor warnings upon the opening of a workflow with tools that have changed. The values mention here may need to be manually set prior to saving.
If error messages are ignored and the user tries to run a workflow even with errors, Galaxy may give a "Workflow failed" message similar to this, which gives the first clue as to which tools are preventing the workflow from running.