TARGENE / TargeneCore.jl

Core Functionalities for TarGene
Apache License 2.0
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make targene specific outputs #194

Closed olivierlabayle closed 1 week ago

olivierlabayle commented 2 weeks ago

The "make-outputs" command will create:

If sIeve variance plateau is required, an additional SAMPLE_IDS column is made, I discard it from the results since it is only used to build the curves.

This PR also brings the sieve variance plateau back into this package to make the TMLECLI more what it actually should be.

codecov[bot] commented 2 weeks ago

Codecov Report

Attention: Patch coverage is 98.86364% with 2 lines in your changes missing coverage. Please review.

Project coverage is 96.41%. Comparing base (8576e28) to head (c413a97). Report is 4 commits behind head on main.

Files with missing lines Patch % Lines
src/sieve_variance.jl 98.05% 2 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #194 +/- ## ========================================== + Coverage 95.64% 96.41% +0.77% ========================================== Files 5 10 +5 Lines 367 613 +246 ========================================== + Hits 351 591 +240 - Misses 16 22 +6 ```

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