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TARGENE
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targene-pipeline
Nextflow pipeline for Targeted-Learning of genetic effects
MIT License
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Week 19/02/2024
#144
Closed
olivierlabayle
closed
6 months ago
olivierlabayle
commented
6 months ago
Admin:
[x] Book flights and accomodations Copenhagen
Learning:
[ ] TMLE lecture / Semi parametrics / Causal Inference reading
[ ] Read one paper from Ideas:
https://github.com/TARGENE/targene-pipeline/issues/97
TarGene:
[ ] Workout serialization format for fast post loading of results
VDR Study:
[ ]
Discovery Analysis
[x]
Neg control inflation
[x] Issue with rs150415348 has only one allele, how did it make it through? Maybe not filtered but no estimand.
[ ] Rerun with new targene release
[ ] Run Randomized Test
[x]
https://github.com/TARGENE/targene-pipeline/issues/120
Simulation Study:
[ ] Start to write estimator comparison script
https://github.com/TARGENE/targene-pipeline/issues/126
Admin:
Learning:
TarGene:
VDR Study:
Simulation Study: