issues
search
TARGENE
/
targene-pipeline
Nextflow pipeline for Targeted-Learning of genetic effects
MIT License
11
stars
0
forks
source link
Week 20/05/2024
#180
Closed
olivierlabayle
closed
3 months ago
olivierlabayle
commented
3 months ago
Misc:
[x] CDT conf
[x] Write Thesis
[x] Write cover letter WSI
[x] Apply WSI
[x] [CHAI 17th June](Apply
https://www.jobs.ac.uk/job/DHO645/research-associate-in-causal-ai
)
[ ]
Cambridge 9th June 2024
Simulation Study:
[x]
GWAS based simu
[ ]
Analysis
[x] Integrate into TarGene.
VDR:
[ ] On new branch: Use eQTLGen to identify more eQTLs
[ ] Look at what Breeshey has done and potentially reuse or upgrade.
[ ] Rerun
[x] Clean repo make 3 run configs for sex traits merge on main
[x] Rerun
[ ] Neg control again using the bootstrap null
TMLE.jl:
[ ] Make ComposedEstimands function agnostic
[ ] Add a "famous" simulation to docs?
Misc:
Simulation Study:
VDR:
TMLE.jl: