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A systematic compilation of all works about the transportome, or transportome-related
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Double issue in `ICT.bib/Library/Research Articles /by transportomic target/` #4

Closed Feat-FeAR closed 8 months ago

Feat-FeAR commented 1 year ago
  1. One entry is annotated with Transporter instead of Transporters, thus creating a new sub-category
  2. That entry also has a slash in its title that produces a subdirectory!!

The culprit is: (2017) - Saccharomyces cerevisiae: A CRISPR/Cas9-based exploration into the elusive mechanism for lactate export in Saccharomyces cerevisiae

Feat-FeAR commented 1 year ago

I found out that the same also happens for:

Feat-FeAR commented 1 year ago

A bit more systematic search returned 9 results (only the first 4 are interesting for ICT::bib):

$ grep 'title = {' library.bib | grep '/'

title = {{A CRISPR/Cas9-based exploration into the elusive mechanism for lactate export in Saccharomyces cerevisiae}},
title = {{Alteration and dysfunction of ion channels/transporters in a hypoxic microenvironment results in the development and progression of gastric cancer}},
title = {{Genetic disorders of transporters/channels in the inner ear and their relation to the kidney}},
title = {{Expression alteration and dysfunction of ion channels/transporters in the parietal cells induces gastric diffused mucosal injury}},
title = {{Middle-down approach: a choice to sequence and characterize proteins/proteomes by mass spectrometry}},
title = {{THE CONCISE GUIDE TO PHARMACOLOGY 2019/20: Introduction and Other Protein Targets}},
title = {{Accessing Expert-Curated Pharmacological Data in the IUPHAR/BPS Guide to PHARMACOLOGY}},
title = {{The IUPHAR/BPS guide to PHARMACOLOGY in 2022: curating pharmacology for COVID-19, malaria and antibacterials}},
title = {{The mRNA transportome of the BicD/Egl transport machinery}},
Feat-FeAR commented 1 year ago

Modifying titles in the bib file does not seem the good way to go... We should implement a check in the python script to prevent filenames having slashes (maybe sobstitute them with an hypen).

Feat-FeAR commented 8 months ago

Solved by commit 5bbc3dee4a6d5529ab237ba80abcfbbf74984651