Is anyone else experiencing this issue when running kat plot spectra-hist?
(kat_env) KAT_kmer_analysis % kat plot spectra-hist kat.hist
Kmer Analysis Toolkit (KAT) V2.4.2
Traceback (most recent call last):
File "/usr/local/Cellar/kat/2.4.2/share/kat/scripts/kat/plot/spectra_hist.py", line 6, in <module>
from misc import *
File "/usr/local/Cellar/kat/2.4.2/share/kat/scripts/kat/plot/misc.py", line 1, in <module>
import numpy as np
ModuleNotFoundError: No module named 'numpy'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/Cellar/kat/2.4.2/share/kat/scripts/kat/plot/spectra_hist.py", line 8, in <module>
from kat.plot.misc import *
File "/usr/local/Cellar/kat/2.4.2/share/kat/scripts/kat/plot/misc.py", line 1, in <module>
import numpy as np
ModuleNotFoundError: No module named 'numpy'
../lib/include/kat/pyhelper.hpp(159): Throw in function void kat::PyHelper::execute(const std::__1::string, int, char **)
Dynamic exception type: boost::wrapexcept<kat::KatPythonException>
std::exception::what: std::exception
[kat::KatPythonError*] = Unexpected python error
I am doing this in a conda environment with python 3.6 and all the necessary python packages, including numpy. I am unclear how to proceed with this, so would appreciate any help here. Thanks!
Is anyone else experiencing this issue when running kat plot spectra-hist?
I am doing this in a conda environment with python 3.6 and all the necessary python packages, including numpy. I am unclear how to proceed with this, so would appreciate any help here. Thanks!