kmer analysis with more than 6 x ploidy level of the genome

TGAC / KAT

The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.

http://www.earlham.ac.uk/kat-tools

GNU General Public License v3.0

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kmer analysis with more than 6 x ploidy level of the genome #183

Open rahulrca opened 10 months ago

rahulrca commented 10 months ago

Hello, I am attempting to calculate the kmer profile of a dodecaploid genome that is 12x in ploidy. I have tried using GenomeScope and GenomeScope version 2, but I was only able to obtain results up to hexaploid using GenomeScope version 2. Could you please advise me on calculating the kmer profile for a 12x ploidy genome?