Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.
but that either didn't change the behavior, or it stopped any editor window from opening. The latter seems less user-friendly, so I left #67 as it were.
Update
In a Debian installation, no editor window opened, and file.edit(file.path(Sys.getenv('HOME'), '.Renviron')) yielded a semi-error about the file being open already.
[ ] try the install again after deleting utils.R entirely
A minor issue remains after #62: 2 editor windows are opened, upon
devtools::install_github("tibhannover/BacDiveR")
when no.Renviron
file is present.This is not very user-friendly. I already tried deleting:
https://github.com/TIBHannover/BacDiveR/blob/6e02a7bea888f71cde76581b4b5b82f20387abf9/R/prepare_Renviron.R#L46
and
https://github.com/TIBHannover/BacDiveR/blob/6e02a7bea888f71cde76581b4b5b82f20387abf9/R/utils.R#L14
but that either didn't change the behavior, or it stopped any editor window from opening. The latter seems less user-friendly, so I left #67 as it were.
Update
In a Debian installation, no editor window opened, and
file.edit(file.path(Sys.getenv('HOME'), '.Renviron'))
yielded a semi-error about the file being open already.utils.R
entirely.onLoad
&.onAttach