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TIO-IKIM / CellViT

CellViT: Vision Transformers for Precise Cell Segmentation and Classification
https://doi.org/10.1016/j.media.2024.103143
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How to calculate the STD metrics shown in Table 3 of your paper? #31

Closed windygoo closed 10 months ago

FabianHoerst commented 10 months ago

Average over the 3 folds, take the standard deviation with the np.std

windygoo commented 10 months ago

first calculate the std for each tissue across three folds and compute the average across all tissues Or first calculate the std for all tissues in each fold and compute the average std across three folds.

FabianHoerst commented 10 months ago

Please be more precise in your question next time from the beginning and do not just add a title. I do not want to guess your problems.. Average the folds to get tissue results, then average this.

windygoo commented 10 months ago

Please be more precise in your question next time from the beginning and do not just add a title. I do not want to guess your problems.. Average the folds to get tissue results, then average this.

Get it! Thanks!