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TNTurnerLab / HAT

HAT is a set of tools for calling de novo variants from whole-genome sequencing data.
https://pubmed.ncbi.nlm.nih.gov/38175776/
MIT License
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Only for human data? #1

Open cahuparo opened 6 months ago

cahuparo commented 6 months ago

Does this tool work for other organisms? Since deepvariant is highly sensitive to trained models for human variants.

Have you tested it on other organisms?

jng2 commented 6 months ago

Hello,

We've only tested this pipeline on human data, so we can't speak on the performance when running it on other organisms.