TRIQS / triqs

a Toolbox for Research on Interacting Quantum Systems
https://triqs.github.io
GNU General Public License v3.0
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[unstable] Building docs crashes sphinx with "'ascii' codec can't decode byte 0xe2 in position 75" #504

Closed HugoStrand closed 6 years ago

HugoStrand commented 6 years ago

I am trying to build the docs on unstable but after the fixing includes to c++2rst by hand I get the error

Encoding error:
'ascii' codec can't decode byte 0xe2 in position 75: ordinal not in range(128)
The full traceback has been saved in /var/folders/p9/bgyyj82s2vzd0k7swf3c6wwm0000gn/T/sphinx-err-WWZPxC.log, if you want to report the issue to the developers.
make[2]: *** [doc/html/contents.html] Error 1
make[1]: *** [doc/CMakeFiles/docs_sphinx.dir/all] Error 2
make: *** [all] Error 2

the sphinx error dump is not so informative

[cbuild] $ cat /var/folders/p9/bgyyj82s2vzd0k7swf3c6wwm0000gn/T/sphinx-err-WWZPxC.log
# Sphinx version: 1.6.3
# Python version: 2.7.14 (CPython)
# Docutils version: 0.14 
# Jinja2 version: 2.9.6
# Last messages:
#   reading sources... [ 87%] reference/statistical_analysis/contents
#   reading sources... [ 88%] reference/statistical_analysis/green_function
#   reading sources... [ 88%] reference/statistical_analysis/ising2d
#   reading sources... [ 88%] reference/statistical_analysis/jackknife
#   reading sources... [ 89%] reference/utilities/contents
#   reading sources... [ 89%] reference/utilities/exceptions
#   reading sources... [ 89%] reference/utilities/python_include_mess
#   reading sources... [ 90%] reference/utilities/tupletools
#   reading sources... [ 90%] tour/contents
#   reading sources... [ 90%] tour/ctqmc
# Loaded extensions:
#   sphinx.ext.mathjax (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/mathjax.pyc
#   autorun (unknown version) from /Users/hugstr/dev/triqs/cbuild/doc/sphinxext/autorun/autorun.pyc
#   ipython_console_highlighting (unknown version) from /Users/hugstr/dev/triqs/cbuild/doc/sphinxext/numpydoc/ipython_console_highlighting.pyc
#   sphinx.ext.viewcode (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/viewcode.pyc
#   sphinx.ext.todo (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/todo.pyc
#   sphinx.ext.autodoc (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/autodoc.pyc
#   sphinx.ext.intersphinx (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/intersphinx.pyc
#   sphinx.ext.doctest (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/doctest.pyc
#   alabaster (0.7.6) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/alabaster/__init__.pyc
#   plot_directive (unknown version) from /Users/hugstr/dev/triqs/cbuild/doc/sphinxext/numpydoc/plot_directive.pyc
#   triqs_example (unknown version) from /Users/hugstr/dev/triqs/cbuild/doc/sphinxext/triqs_example/triqs_example.pyc
#   numpydoc (unknown version) from /Users/hugstr/dev/triqs/cbuild/doc/sphinxext/numpydoc/numpydoc.pyc
#   sphinx.ext.autosummary (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/autosummary/__init__.pyc
Traceback (most recent call last):
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/cmdline.py", line 306, in main
    app.build(opts.force_all, filenames)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/application.py", line 339, in build
    self.builder.build_update()
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 331, in build_update
    'out of date' % len(to_build))
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 344, in build
    updated_docnames = set(self.env.update(self.config, self.srcdir, self.doctreedir))
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/environment/__init__.py", line 583, in update
    self._read_serial(docnames, self.app)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/environment/__init__.py", line 602, in _read_serial
    self.read_doc(docname, app)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/environment/__init__.py", line 723, in read_doc
    pub.publish()
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/core.py", line 217, in publish
    self.settings)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/io.py", line 74, in read
    self.parse()
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/readers/__init__.py", line 78, in parse
    self.parser.parse(self.input, document)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/parsers/rst/__init__.py", line 191, in parse
    self.statemachine.run(inputlines, document, inliner=self.inliner)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/parsers/rst/states.py", line 171, in run
    input_source=document['source'])
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/statemachine.py", line 239, in run
    context, state, transitions)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/statemachine.py", line 460, in check_line
    return method(match, context, next_state)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/parsers/rst/states.py", line 2753, in underline
    self.section(title, source, style, lineno - 1, messages)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/parsers/rst/states.py", line 327, in section
    self.new_subsection(title, lineno, messages)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/parsers/rst/states.py", line 395, in new_subsection
    node=section_node, match_titles=True)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/parsers/rst/states.py", line 282, in nested_parse
    node=node, match_titles=match_titles)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/parsers/rst/states.py", line 196, in run
    results = StateMachineWS.run(self, input_lines, input_offset)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/statemachine.py", line 239, in run
    context, state, transitions)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/statemachine.py", line 460, in check_line
    return method(match, context, next_state)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/parsers/rst/states.py", line 2326, in explicit_markup
    nodelist, blank_finish = self.explicit_construct(match)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/parsers/rst/states.py", line 2338, in explicit_construct
    return method(self, expmatch)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/parsers/rst/states.py", line 2081, in directive
    directive_class, match, type_name, option_presets)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/docutils/parsers/rst/states.py", line 2130, in run_directive
    result = directive_instance.run()
  File "/Users/hugstr/dev/triqs/cbuild/doc/sphinxext/autorun/autorun.py", line 79, in run
    out += ''.join(stdout).decode(output_encoding)
UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 75: ordinal not in range(128)
HugoStrand commented 6 years ago

The above error seems not to be reproducible

I have manually added my include paths in ./doc/CMakeList.txt

add_custom_command(OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/cpp2rst.log DEPENDS triqs 
           COMMAND c++2rst ${CPP_NAMESPACES} 
           ${CMAKE_CURRENT_SOURCE_DIR}/reference/doc_root.hpp 
           --output_directory ${CMAKE_CURRENT_BINARY_DIR}/cpp2rst_generated
           --includes ${CMAKE_SOURCE_DIR}/ 
           --includes ${CMAKE_BINARY_DIR}/Config 
           --includes /Users/hugstr/dev/triqs
           --includes /opt/local/include
           --includes /opt/local/include/openmpi-clang40
           --cxxflags "-std=c++14 -DTRIQS_BUILDING_LIBRARY" 
           2>&1 > cpp2rst.log
           VERBATIM)

and get the new sphinx error

Exception occurred:
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/util/parallel.py", line 118, in _join_one
    exc, logs, result = pipe.recv()
EOFError
The full traceback has been saved in /var/folders/p9/bgyyj82s2vzd0k7swf3c6wwm0000gn/T/sphinx-err-hCbhSI.log, if you want to report the issue to the developers.
Please also report this if it was a user error, so that a better error message can be provided next time.
A bug report can be filed in the tracker at <https://github.com/sphinx-doc/sphinx/issues>. Thanks!
# Sphinx version: 1.6.3
# Python version: 2.7.14 (CPython)
# Docutils version: 0.14 
# Jinja2 version: 2.9.6
# Last messages:
#   pickling environment...
#   done
#   checking consistency...
#   done
#   preparing documents...
#   done
#   writing output... [  6%] applications .. cpp2rst_generated/triqs/det_manip/det_manip/insert2
#   writing output... [ 13%] cpp2rst_generated/triqs/det_manip/det_manip/insert2_at_end .. cpp2rst_generated/triqs/det_manip/det_manip/try_insert
#   writing output... [ 20%] cpp2rst_generated/triqs/det_manip/det_manip/try_insert2 .. cpp2rst_generated/triqs/mc_tools/mc_generic/get_total_time
#   writing output... [ 26%] cpp2rst_generated/triqs/mc_tools/mc_generic/get_warmup_time .. cpp2rst_generated/triqs/mc_tools/random_generator/constructor
# Loaded extensions:
#   sphinx.ext.mathjax (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/mathjax.pyc
#   autorun (unknown version) from /Users/hugstr/dev/triqs/cbuild_test/doc/sphinxext/autorun/autorun.pyc
#   ipython_console_highlighting (unknown version) from /Users/hugstr/dev/triqs/cbuild_test/doc/sphinxext/numpydoc/ipython_console_highlighting.pyc
#   sphinx.ext.viewcode (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/viewcode.pyc
#   sphinx.ext.todo (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/todo.pyc
#   sphinx.ext.autodoc (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/autodoc.pyc
#   sphinx.ext.intersphinx (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/intersphinx.pyc
#   sphinx.ext.doctest (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/doctest.pyc
#   alabaster (0.7.6) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/alabaster/__init__.pyc
#   plot_directive (unknown version) from /Users/hugstr/dev/triqs/cbuild_test/doc/sphinxext/numpydoc/plot_directive.pyc
#   triqs_example (unknown version) from /Users/hugstr/dev/triqs/cbuild_test/doc/sphinxext/triqs_example/triqs_example.pyc
#   numpydoc (unknown version) from /Users/hugstr/dev/triqs/cbuild_test/doc/sphinxext/numpydoc/numpydoc.pyc
#   sphinx.ext.autosummary (1.6.3) from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/autosummary/__init__.pyc
Traceback (most recent call last):
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/cmdline.py", line 306, in main
    app.build(opts.force_all, filenames)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/application.py", line 339, in build
    self.builder.build_update()
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 331, in build_update
    'out of date' % len(to_build))
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 397, in build
    self.write(docnames, list(updated_docnames), method)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 432, in write
    nproc=self.app.parallel - 1)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 468, in _write_parallel
    tasks.add_task(write_process, arg)
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/util/parallel.py", line 107, in add_task
    self._join_one()
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/util/parallel.py", line 118, in _join_one
    exc, logs, result = pipe.recv()
EOFError
HugoStrand commented 6 years ago

This error is preceded by the concise sphinx warnings

[100%] Generating html/contents.html
Running Sphinx v1.6.3
Mathjax:  /Users/hugstr/src/MathJax/MathJax.js?config=default
/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/util/compat.py:40: RemovedInSphinx17Warning: sphinx.util.compat.Directive is deprecated and will be removed in Sphinx 1.7, please use docutils' instead.
  RemovedInSphinx17Warning)
loading pickled environment... not yet created
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 287 source files that are out of date
updating environment: 287 added, 0 changed, 0 removed
/Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/local/__init__.py:37: UserWarning:                       
***************************************************

from pytriqs.gf.local import XXX  

is deprecated. Replace it by 

from pytriqs.gf import XXX")

****************************************************
  ****************************************************""")
Starting on 1 Nodes at : 2017-11-08 14:32:11.876780ravais                                               
reading sources... [100%] versions                                                                      
WARNING: the autorun extension does not declare if it is safe for parallel reading, assuming it isn't - please ask the extension author to check and make it explicit
WARNING: doing serial read
/Users/hugstr/dev/triqs/cbuild_test/doc/about.rst:22: WARNING: Footnote [#] is not referenced.
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/changelog.rst:8: (SEVERE/4) Problems with "include" directive path:
InputError: [Errno 2] No such file or directory: '../ChangeLog.md'.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:39: WARNING: Blank line required after table.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:128: WARNING: Unexpected indentation.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:127: WARNING: Blank line required after table.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:189: WARNING: Unexpected indentation.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:188: WARNING: Blank line required after table.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:188: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/det_manip/det_manip/boost'
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:188: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/det_manip/det_manip/h5_write'
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:188: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/det_manip/det_manip/h5_read'
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:188: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/det_manip/det_manip/swap'
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:188: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/det_manip/det_manip/foreach'
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip/constructor.rst:34: WARNING: Unexpected indentation.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip/get_x_internal_order.rst:23: WARNING: Inline emphasis start-string without end-string.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip/try_insert2.rst:28: WARNING: Definition list ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/mc_generic.rst:74: WARNING: Unexpected indentation.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/mc_generic.rst:73: WARNING: Blank line required after table.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/mc_generic.rst:110: WARNING: Unexpected indentation.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/mc_generic.rst:109: WARNING: Blank line required after table.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/mc_generic.rst:109: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/mc_tools/mc_generic/h5_write'
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/mc_generic.rst:109: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/mc_tools/mc_generic/h5_read'
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/move_set.rst:42: WARNING: Unexpected indentation.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/move_set.rst:41: WARNING: Blank line required after table.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/move_set.rst:65: WARNING: Unexpected indentation.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/move_set.rst:64: WARNING: Blank line required after table.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/move_set.rst:64: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/mc_tools/move_set/h5_write'
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/move_set.rst:64: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/mc_tools/move_set/h5_read'
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/random_generator.rst:19: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/random_generator.rst:36: WARNING: Unexpected indentation.
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/random_generator.rst:35: WARNING: Blank line required after table.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/IO.rst:17: WARNING: Include file u'./IO_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/Interop_Python.rst:79: WARNING: Literal block expected; none found.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/algebras.rst:13: WARNING: Include file u'./algebras_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/algebras.rst:14: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/algebras.rst:21: WARNING: Include file u'./algebras_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/blas_lapack.rst:28: WARNING: Include file u'./blas_lapack_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/blas_lapack.rst:29: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/blas_lapack.rst:54: WARNING: Include file u'./diagonalization_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/concepts.rst:22: WARNING: Bullet list ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/concepts.rst:189: WARNING: Include file u'./concepts_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/STL.rst:25: WARNING: Include file u'./STL_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/call.rst:33: WARNING: Include file u'./call_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/call.rst:34: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/call.rst:69: WARNING: Include file u'./call_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/call.rst:70: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/arrays/range'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/call.rst:96: WARNING: Include file u'./call_2.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/ellipsis.rst:14: WARNING: Include file u'./range_ell_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/ellipsis.rst:22: WARNING: Include file u'./range_ell_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/reg_constructors.rst:85: WARNING: Include file u'./reg_constructors_0.cpp' not found or reading it failed
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/resize.rst:10: (WARNING/2) Error when parsing function declaration.
If the function has no return type:
  Error in declarator or parameters and qualifiers
  Invalid definition: Expected identifier in nested name, got keyword: void [error at 4]
    void resize(size_t, ..., size_t)
    ----^
If the function has a return type:
  Error in declarator or parameters and qualifiers
  If pointer to member declarator:
    Invalid definition: Expected '::' in pointer to member (function). [error at 11]
      void resize(size_t, ..., size_t)
      -----------^
  If declarator-id:
    Invalid definition: Expected ")" after "..." in parameters_and_qualifiers. [error at 23]
      void resize(size_t, ..., size_t)
      -----------------------^
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/resize.rst:19: WARNING: Include file u'./resize_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/resize.rst:35: WARNING: Include file u'./resize_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/swap.rst:25: WARNING: Include file u'./swap_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/containers/swap.rst:40: WARNING: Include file u'./swap_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/contents.rst:11: WARNING: toctree contains reference to nonexisting document u'reference/arrays/move_swap'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/contents.rst:11: WARNING: toctree contains reference to nonexisting document u'reference/arrays/STL'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/debug.rst:21: WARNING: Include file u'./debug_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/foreach.rst:52: WARNING: Include file u'./foreach_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/foreach.rst:84: WARNING: Include file u'./foreach_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/h5_rw.rst:9: WARNING: Include file u'./h5_rw_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/h5_rw.rst:10: WARNING: Include file u'examples_code/h5_rw.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/h5_stack.rst:30: WARNING: toctree contains reference to nonexisting document u'triqs/arrays/array_stack'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/h5_stack.rst:41: WARNING: Include file u'examples_code/h5_stack_ex_sca.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/h5_stack.rst:45: WARNING: Include file u'examples_code/h5_stack_ex.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/implementation_notes/concepts.rst:154: WARNING: Bullet list ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/implementation_notes/concepts.rst:163: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/implementation_notes/slicing.rst:25: WARNING: Bullet list ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/implementation_notes/slicing.rst:26: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/implementation_notes/slicing.rst:29: WARNING: Inline literal start-string without end-string.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/implementation_notes/slicing.rst:31: WARNING: Definition list ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/implementation_notes/slicing.rst:32: WARNING: Inline literal start-string without end-string.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/implementation_notes/slicing.rst:39: WARNING: Bullet list ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/lazy.rst:21: WARNING: Include file u'./lazy_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/map.rst:44: WARNING: Include file u'./map_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/map.rst:45: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/map.rst:98: WARNING: Include file u'./map_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/map.rst:99: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/play_with_concept.rst:37: WARNING: Include file u'./play_with_concept_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/shape.rst:23: WARNING: Include file u'./shape_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/simple_fnt.rst:54: WARNING: Include file u'./simple_fnt_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/atom_diag/contents.rst:26: WARNING: toctree contains reference to nonexisting document u'cpp2doc_generated/triqs/atom_diag/atom_diag'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/atom_diag/contents.rst:40: WARNING: Include file u'./atom_diag_example.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/atom_diag/functions.rst:6: WARNING: toctree contains reference to nonexisting document u'cpp2doc_generated/triqs/atom_diag/partition_function'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/atom_diag/functions.rst:6: WARNING: toctree contains reference to nonexisting document u'cpp2doc_generated/triqs/atom_diag/atomic_density_matrix'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/atom_diag/functions.rst:6: WARNING: toctree contains reference to nonexisting document u'cpp2doc_generated/triqs/atom_diag/trace_rho_op'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/atom_diag/functions.rst:6: WARNING: toctree contains reference to nonexisting document u'cpp2doc_generated/triqs/atom_diag/act'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/atom_diag/functions.rst:6: WARNING: toctree contains reference to nonexisting document u'cpp2doc_generated/triqs/atom_diag/quantum_number_eigenvalues'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/atom_diag/functions.rst:6: WARNING: toctree contains reference to nonexisting document u'cpp2doc_generated/triqs/atom_diag/quantum_number_eigenvalues_checked'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/atom_diag/functions.rst:6: WARNING: toctree contains reference to nonexisting document u'cpp2doc_generated/triqs/atom_diag/atomic_gf'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/c++/mpi/mpi.rst:143: WARNING: Include file u'./mpi_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/c++/mpi/mpi.rst:144: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/assign.rst:36: WARNING: Include file u'./assign_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/assign.rst:37: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/assign.rst:69: WARNING: Include file u'./assign_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/examples/lazy_sum.rst:9: WARNING: Include file u'/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/examples/src/sum_functional.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/expressions_eval.rst:25: WARNING: Include file u'./expressions_eval_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/expressions_eval.rst:26: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/expressions_form.rst:47: WARNING: Include file u'./expressions_form_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/expressions_form.rst:48: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/function.rst:77: WARNING: Include file u'./function_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/introduction.rst:10: WARNING: Include file u'./introduction_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/overload.rst:22: WARNING: Include file u'./overload_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/overload.rst:23: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/overload.rst:30: WARNING: Include file u'./overload_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/overload.rst:45: WARNING: Include file u'./overload_2.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/clef/overload.rst:46: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/conventions.rst:104: WARNING: Bullet list ends without a blank line; unexpected unindent.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.cfunction:18: WARNING: Unexpected indentation.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.cfunction:30: WARNING: Unexpected indentation.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.cfunction:33: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.cfunction:36: WARNING: Definition list ends without a blank line; unexpected unindent.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.class_:34: WARNING: Unexpected indentation.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.class_:36: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.class_:58: WARNING: Unexpected indentation.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.class_:59: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.class_.add_constructor:13: WARNING: Unexpected indentation.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.class_.add_constructor:18: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.class_.add_method:13: WARNING: Unexpected indentation.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.class_.add_method:18: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.class_.deduce_inplace_arithmetic:3: WARNING: Inline emphasis start-string without end-string.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.class_.deduce_inplace_arithmetic:3: WARNING: Inline emphasis start-string without end-string.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/cpp2py/class.rst:2: WARNING: Unknown target name: "class".
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/cpp2py/contents.rst:21: WARNING: toctree contains reference to nonexisting document u'reference/cpp2py/advanced'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/cpp2py/contents.rst:21: WARNING: toctree contains reference to nonexisting document u'reference/cpp2py/example'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/cpp2py/magic.rst:9: WARNING: download file not readable: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/cpp2py/Cpp2pyDemo.ipynb
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.module_.add_function:13: WARNING: Unexpected indentation.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.module_.add_function:18: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/apps/cpp2py/lib/python2.7/site-packages/cpp2py/wrap_generator.py:docstring of cpp2py.wrap_generator.module_.generate_code:8: WARNING: Unexpected indentation.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/cpp2py/module.rst:3: WARNING: Unknown target name: "module".
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/cpp2py/principle.rst:6: WARNING: Unknown target name: "c++2py.png".
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/determinant_manipulation/contents.rst:4: WARNING: duplicate label det_manip, other instance in /Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/determinant_manipulation/det_manip.rst:155: WARNING: toctree contains reference to nonexisting document u'triqs/det_manip/det_manip'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/determinant_manipulation/det_manip.rst:164: WARNING: Include file u'./det_manip_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/clef.rst:20: WARNING: Include file u'./clef_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/contents.rst:21: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/auto_ref'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/fit_tail.rst:13: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/gfs/fit_tail'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/fit_tail.rst:23: WARNING: Include file u'./fit_tail_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/fourier.rst:74: WARNING: Include file u'./fourier_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/fourier.rst:157: WARNING: malformed hyperlink target.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/fourier.rst:182: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/fourier.rst:208: WARNING: malformed hyperlink target.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/fourier.rst:233: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/fourier_impl_notes.rst:104: WARNING: Unexpected indentation.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/fourier_impl_notes.rst:105: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_and_view.rst:120: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_subcript'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_and_view.rst:120: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/compound_ops'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_and_view.rst:120: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/call'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_and_view.rst:120: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/resize'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_and_view.rst:120: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/STL'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_and_view.rst:148: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/stream'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_and_view.rst:148: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/swap'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_block.rst:132: WARNING: Include file u'./gf_block_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_constructors.rst:43: WARNING: Include file u'./gf_constructors_0.cpp' not found or reading it failed
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_data.rst:13: (WARNING/2) Error when parsing function declaration.
If the function has no return type:
  Error in declarator or parameters and qualifiers
  Invalid definition: Expecting "(" in parameters_and_qualifiers. [error at 7]
    mesh_t const & () const
    -------^
If the function has a return type:
  Error in declarator
  If pointer to member declarator:
    Invalid definition: Expected identifier in nested name. [error at 15]
      mesh_t const & () const
      ---------------^
  If declId, parameters, and qualifiers:
    Invalid definition: Expected identifier in nested name. [error at 15]
      mesh_t const & () const
      ---------------^
  If parenthesis in noptr-declarator:
    Error in declarator or parameters and qualifiers
    If pointer to member declarator:
      Invalid definition: Expected identifier in nested name. [error at 16]
        mesh_t const & () const
        ----------------^
    If declarator-id:
      Invalid definition: Expected identifier in nested name. [error at 16]
        mesh_t const & () const
        ----------------^
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_data.rst:23: (WARNING/2) Error when parsing function declaration.
If the function has no return type:
  Error in declarator or parameters and qualifiers
  Invalid definition: Expecting "(" in parameters_and_qualifiers. [error at 7]
    data_t const & () const
    -------^
If the function has a return type:
  Error in declarator
  If pointer to member declarator:
    Invalid definition: Expected identifier in nested name. [error at 15]
      data_t const & () const
      ---------------^
  If declId, parameters, and qualifiers:
    Invalid definition: Expected identifier in nested name. [error at 15]
      data_t const & () const
      ---------------^
  If parenthesis in noptr-declarator:
    Error in declarator or parameters and qualifiers
    If pointer to member declarator:
      Invalid definition: Expected identifier in nested name. [error at 16]
        data_t const & () const
        ----------------^
    If declarator-id:
      Invalid definition: Expected identifier in nested name. [error at 16]
        data_t const & () const
        ----------------^
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_data.rst:24: (WARNING/2) Error when parsing function declaration.
If the function has no return type:
  Error in declarator or parameters and qualifiers
  Invalid definition: Expecting "(" in parameters_and_qualifiers. [error at 13]
    data_t       & ()
    -------------^
If the function has a return type:
  Error in declarator
  If pointer to member declarator:
    Invalid definition: Expected identifier in nested name. [error at 15]
      data_t       & ()
      ---------------^
  If declId, parameters, and qualifiers:
    Invalid definition: Expected identifier in nested name. [error at 15]
      data_t       & ()
      ---------------^
  If parenthesis in noptr-declarator:
    Error in declarator or parameters and qualifiers
    If pointer to member declarator:
      Invalid definition: Expected identifier in nested name. [error at 16]
        data_t       & ()
        ----------------^
    If declarator-id:
      Invalid definition: Expected identifier in nested name. [error at 16]
        data_t       & ()
        ----------------^
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_data.rst:34: (WARNING/2) Error when parsing function declaration.
If the function has no return type:
  Error in declarator or parameters and qualifiers
  Invalid definition: Expecting "(" in parameters_and_qualifiers. [error at 14]
    singularity_t const & () const
    --------------^
If the function has a return type:
  Error in declarator
  If pointer to member declarator:
    Invalid definition: Expected identifier in nested name. [error at 22]
      singularity_t const & () const
      ----------------------^
  If declId, parameters, and qualifiers:
    Invalid definition: Expected identifier in nested name. [error at 22]
      singularity_t const & () const
      ----------------------^
  If parenthesis in noptr-declarator:
    Error in declarator or parameters and qualifiers
    If pointer to member declarator:
      Invalid definition: Expected identifier in nested name. [error at 23]
        singularity_t const & () const
        -----------------------^
    If declarator-id:
      Invalid definition: Expected identifier in nested name. [error at 23]
        singularity_t const & () const
        -----------------------^
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_data.rst:35: (WARNING/2) Error when parsing function declaration.
If the function has no return type:
  Error in declarator or parameters and qualifiers
  Invalid definition: Expecting "(" in parameters_and_qualifiers. [error at 20]
    singularity         & ()
    --------------------^
If the function has a return type:
  Error in declarator
  If pointer to member declarator:
    Invalid definition: Expected identifier in nested name. [error at 22]
      singularity         & ()
      ----------------------^
  If declId, parameters, and qualifiers:
    Invalid definition: Expected identifier in nested name. [error at 22]
      singularity         & ()
      ----------------------^
  If parenthesis in noptr-declarator:
    Error in declarator or parameters and qualifiers
    If pointer to member declarator:
      Invalid definition: Expected identifier in nested name. [error at 23]
        singularity         & ()
        -----------------------^
    If declarator-id:
      Invalid definition: Expected identifier in nested name. [error at 23]
        singularity         & ()
        -----------------------^
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_data.rst:45: (WARNING/2) Error when parsing function declaration.
If the function has no return type:
  Error in declarator or parameters and qualifiers
  Invalid definition: Expecting "(" in parameters_and_qualifiers. [error at 11]
    symmetry_t const & () const
    -----------^
If the function has a return type:
  Error in declarator
  If pointer to member declarator:
    Invalid definition: Expected identifier in nested name. [error at 19]
      symmetry_t const & () const
      -------------------^
  If declId, parameters, and qualifiers:
    Invalid definition: Expected identifier in nested name. [error at 19]
      symmetry_t const & () const
      -------------------^
  If parenthesis in noptr-declarator:
    Error in declarator or parameters and qualifiers
    If pointer to member declarator:
      Invalid definition: Expected identifier in nested name. [error at 20]
        symmetry_t const & () const
        --------------------^
    If declarator-id:
      Invalid definition: Expected identifier in nested name. [error at 20]
        symmetry_t const & () const
        --------------------^
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_imfreq.rst:85: WARNING: Include file u'./gf_imfreq_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_imfreq.rst:90: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/gfs/is_gf_real'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_imfreq.rst:90: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/gfs/is_gf_real_in_tau'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_imtime.rst:90: WARNING: Include file u'./gf_imtime_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_legendre.rst:59: WARNING: Include file u'./gf_legendre_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_part_eval_curry.rst:8: WARNING: Content block expected for the "warning" directive; none found.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_part_eval_curry.rst:43: WARNING: Include file u'./gf_part_eval_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_product.rst:49: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/:maxdepth: 1'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_product.rst:58: WARNING: Include file u'./gf_product_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_refreq.rst:78: WARNING: Include file u'./gf_refreq_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_retime.rst:78: WARNING: Include file u'./gf_retime_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/:hidden:'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/constructor'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/domain'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/size'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/full_size'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/index_to_point'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/index_to_linear'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/linear_to_index'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/first_index'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/last_index'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/first_index_window'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/last_index_window'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/positive_only'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/operator[]'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:89: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/gf_mesh<imfreq>/is_within_boundary'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:123: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/:hidden:'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:123: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/ gf_mesh<imfreq>/mpi_scatter'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:123: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/ gf_mesh<imfreq>/mpi_gather'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:123: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/ gf_mesh<imfreq>/h5_write'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst:123: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/ gf_mesh<imfreq>/h5_read'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_imtime.rst:60: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/:hidden:'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_imtime.rst:60: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/ gf_mesh<imtime>/constructor'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_imtime.rst:60: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/ gf_mesh<imtime>/get_interpolation_data'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_imtime.rst:60: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/ gf_mesh<imtime>/evaluate'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/tail.rst:16: WARNING: Include file u'./tail_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/tail.rst:18: WARNING: toctree contains reference to nonexisting document u'reference/gfs/c++/triqs/gfs/tail_impl'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/tail.rst:29: WARNING: Include file u'./tail_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/tail.rst:30: WARNING: Explicit markup ends without a blank line; unexpected unindent.
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_imfreq.py:docstring of pytriqs.gf.local.GfImFreq:4: (WARNING/2) Title underline too short.

Parameters (KEYWORD argument ONLY)
----------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_imfreq.py:docstring of pytriqs.gf.local.GfImFreq:4: (SEVERE/4) Unexpected section title.

Parameters (KEYWORD argument ONLY)
----------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_imfreq.py:docstring of pytriqs.gf.local.GfImFreq.density:3: (SEVERE/4) Unexpected section title or transition.

--------------------------------------------------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_imfreq.py:docstring of pytriqs.gf.local.GfImFreq.set_from_fourier:3: (SEVERE/4) Unexpected section title or transition.

--------------------------------------------------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_imfreq.py:docstring of pytriqs.gf.local.GfImFreq.set_from_legendre:3: (SEVERE/4) Unexpected section title or transition.

--------------------------------------------------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_imtime.py:docstring of pytriqs.gf.local.GfImTime:4: (WARNING/2) Title underline too short.

Parameters (KEYWORD argument ONLY)
----------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_imtime.py:docstring of pytriqs.gf.local.GfImTime:4: (SEVERE/4) Unexpected section title.

Parameters (KEYWORD argument ONLY)
----------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_imtime.py:docstring of pytriqs.gf.local.GfImTime.set_from_inverse_fourier:3: (SEVERE/4) Unexpected section title or transition.

--------------------------------------------------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_imtime.py:docstring of pytriqs.gf.local.GfImTime.set_from_legendre:3: (SEVERE/4) Unexpected section title or transition.

--------------------------------------------------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_legendre.py:docstring of pytriqs.gf.local.GfLegendre:4: (WARNING/2) Title underline too short.

Parameters (KEYWORD argument ONLY)
----------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_legendre.py:docstring of pytriqs.gf.local.GfLegendre:4: (SEVERE/4) Unexpected section title.

Parameters (KEYWORD argument ONLY)
----------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_legendre.py:docstring of pytriqs.gf.local.GfLegendre.density:3: (SEVERE/4) Unexpected section title or transition.

--------------------------------------------------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_legendre.py:docstring of pytriqs.gf.local.GfLegendre.enforce_discontinuity:3: (SEVERE/4) Unexpected section title or transition.

--------------------------------------------------
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/py/block/GfReFreq.rst:13: WARNING: missing attribute inverse_fourier in object pytriqs.gf.local.GfReFreq
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_refreq.py:docstring of pytriqs.gf.local.GfReFreq:4: (WARNING/2) Title underline too short.

Parameters (KEYWORD argument ONLY)
----------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_refreq.py:docstring of pytriqs.gf.local.GfReFreq:4: (SEVERE/4) Unexpected section title.

Parameters (KEYWORD argument ONLY)
----------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_refreq.py:docstring of pytriqs.gf.local.GfReFreq.set_from_fourier:3: (SEVERE/4) Unexpected section title or transition.

--------------------------------------------------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_refreq.py:docstring of pytriqs.gf.local.GfReFreq.set_from_pade:3: (SEVERE/4) Unexpected section title or transition.

--------------------------------------------------
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/py/block/GfReTime.rst:13: WARNING: missing attribute fourier in object pytriqs.gf.local.GfReTime
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_retime.py:docstring of pytriqs.gf.local.GfReTime:4: (WARNING/2) Title underline too short.

Parameters (KEYWORD argument ONLY)
----------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_retime.py:docstring of pytriqs.gf.local.GfReTime:4: (SEVERE/4) Unexpected section title.

Parameters (KEYWORD argument ONLY)
----------
WARNING: /Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/backwd_compat/gf_retime.py:docstring of pytriqs.gf.local.GfReTime.set_from_inverse_fourier:3: (SEVERE/4) Unexpected section title or transition.

--------------------------------------------------
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/py/descriptors.rst:16: WARNING: Include file u'/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/py/impinbath.py' not found or reading it failed
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/py/descriptors.rst:28: (WARNING/2) autodoc: failed to import module u'pytriqs.gf.local.descriptors'; the following exception was raised:
Traceback (most recent call last):
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 657, in import_object
    __import__(self.modname)
ImportError: No module named descriptors
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/py/tools.rst:7: (WARNING/2) autodoc: failed to import module u'pytriqs.gf.local.tools'; the following exception was raised:
Traceback (most recent call last):
  File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 657, in import_object
    __import__(self.modname)
ImportError: No module named tools
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hdf5/full_ref.rst:4: WARNING: toctree contains reference to nonexisting document u'triqs/h5/file'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hdf5/full_ref.rst:4: WARNING: toctree contains reference to nonexisting document u'triqs/h5/group'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hdf5/full_ref.rst:4: WARNING: toctree contains reference to nonexisting document u'triqs/h5/h5_read'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hdf5/full_ref.rst:4: WARNING: toctree contains reference to nonexisting document u'triqs/h5/h5_write'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hdf5/full_ref.rst:4: WARNING: toctree contains reference to nonexisting document u'triqs/h5/h5_read_attribute'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hdf5/full_ref.rst:4: WARNING: toctree contains reference to nonexisting document u'triqs/h5/h5_write_attribute'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hilbert_space/contents.rst:15: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/hilbert_space/fundamental_operator_set'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hilbert_space/contents.rst:15: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/hilbert_space/hilbert_space'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hilbert_space/contents.rst:15: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/hilbert_space/sub_hilbert_space'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hilbert_space/contents.rst:15: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/hilbert_space/state'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hilbert_space/contents.rst:15: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/hilbert_space/imperative_operator'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hilbert_space/contents.rst:15: WARNING: toctree contains reference to nonexisting document u'cpp2rst_generated/triqs/hilbert_space/space_partition'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hilbert_space/contents.rst:28: WARNING: Include file u'./hilbert_example.cpp' not found or reading it failed
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/lattice_tools/contents.rst:8: (WARNING/2) Title underline too short.

**[triqs/lattice]** Lattice tools
===============================
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/lattice_tools/contents.rst.rst:19: WARNING: line number spec is out of range(1-32): '1-34'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/concepts.rst:40: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/ising.rst:18: WARNING: Include file u'/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/configuration.hpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/ising.rst:25: WARNING: Include file u'/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/moves.hpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/ising.rst:32: WARNING: Include file u'/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/measures.hpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/ising.rst:40: WARNING: Include file u'./ising.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/tutorial.rst:30: WARNING: Include file u'./overview_ex.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/tutorial.rst:92: WARNING: Include file u'/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/overview_ex.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/tutorial.rst:114: WARNING: Include file u'/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/overview_ex.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/tutorial.rst:149: WARNING: Include file u'/Users/hugstr/dev/triqs/cbuild_test/doc/reference/monte_carlo/overview_ex.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/operators/operators.rst:138: WARNING: Literal block ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/operators/operators.rst:145: WARNING: Literal block ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/operators/operators.rst:150: WARNING: Literal block ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/operators/operators.rst:155: WARNING: Literal block ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/operators/operators.rst:163: WARNING: Literal block ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/operators/operators.rst:217: WARNING: Explicit markup ends without a blank line; unexpected unindent.
docstring of pytriqs.operators.util.extractors.dict_to_matrix:12: WARNING: Block quote ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/plotting_protocols/contents.rst:19: WARNING: toctree contains reference to nonexisting document u'reference/plotting_protocols/hdf5/contents'
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/plotting_protocols/fit/fit.rst:13: (WARNING/2) Exception occurred in plotting fit_test
 from /Users/hugstr/dev/triqs/cbuild_test/doc/reference/plotting_protocols/fit/fit_test.py:
Traceback (most recent call last):
  File "/Users/hugstr/dev/triqs/cbuild_test/doc/sphinxext/numpydoc/plot_directive.py", line 472, in run_code
    exec code in ns
  File "<string>", line 9, in <module>
  File "/Users/hugstr/dev/triqs/cbuild_test/pytriqs/gf/gf.py", line 619, in x_data_view
    X, data = numpy.array(X), self.data
NameError: global name 'numpy' is not defined
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/random_generator/contents.rst:8: WARNING: duplicate label random_generator, other instance in /Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/random_generator.rst
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/reference/statistical_analysis/autocorrelation_function.rst:2: (WARNING/2) Title underline too short.

Autocorrelation function
=======================
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/statistical_analysis/autocorrelation_function.rst:26: WARNING: Include file u'./autocorrelation_function_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/statistical_analysis/autocorrelation_time.rst:37: WARNING: Include file u'./autocorrelation_time_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/statistical_analysis/binning.rst:24: WARNING: Include file u'./binning_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/statistical_analysis/contents.rst:78: WARNING: Include file u'./contents_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/statistical_analysis/green_function.rst:12: WARNING: Include file u'./green_function_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/statistical_analysis/ising2d.rst:10: WARNING: Include file u'/Users/hugstr/dev/triqs/cbuild_test/doc/reference/statistical_analysis/src/ising2d.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/statistical_analysis/ising2d.rst:14: WARNING: Include file u'/Users/hugstr/dev/triqs/cbuild_test/doc/reference/statistical_analysis/src/ising2d.output' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/statistical_analysis/jackknife.rst:41: WARNING: Include file u'./jackknife_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/contents.rst:6: WARNING: toctree contains reference to nonexisting document u'reference/utilities/factory'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/contents.rst:6: WARNING: toctree contains reference to nonexisting document u'reference/utilities/mini_vector'
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/exceptions.rst:30: WARNING: Include file u'./exceptions_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/exceptions.rst:31: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/exceptions.rst:33: WARNING: Include file u'./exceptions_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/tupletools.rst:36: WARNING: Include file u'./tupletools_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/tupletools.rst:60: WARNING: Include file u'./tupletools_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/tupletools.rst:83: WARNING: Include file u'./tupletools_2.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/tupletools.rst:107: WARNING: Include file u'./tupletools_3.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/tupletools.rst:166: WARNING: Include file u'./tupletools_4.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/tupletools.rst:199: WARNING: Include file u'./tupletools_reverse.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/utilities/tupletools.rst:229: WARNING: Include file u'./tupletools_called.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/arrays/array_tutorial_cpp.rst:16: WARNING: Include file u'./array_tutorial_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/arrays/array_tutorial_cpp.rst:20: WARNING: Include file u'./array_tutorial_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/arrays/array_tutorial_cpp.rst:26: WARNING: Include file u'./array_tutorial_2.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/arrays/array_tutorial_cpp.rst:32: WARNING: Include file u'./array_tutorial_3.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/arrays/array_tutorial_cpp.rst:38: WARNING: Include file u'./array_tutorial_4.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/arrays/array_tutorial_cpp.rst:42: WARNING: Include file u'./array_tutorial_5.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/arrays/array_tutorial_cpp.rst:46: WARNING: Include file u'./array_tutorial_6.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/arrays/array_tutorial_cpp.rst:50: WARNING: Include file u'./array_tutorial_7.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/arrays/array_tutorial_cpp.rst:51: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/det_manip/det_manip_tutorial_cpp.rst:19: WARNING: Include file u'./det_manip_tutorial_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/det_manip/det_manip_tutorial_cpp.rst:24: WARNING: Include file u'./det_manip_tutorial_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/det_manip/det_manip_tutorial_cpp.rst:29: WARNING: Include file u'./det_manip_tutorial_2.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/det_manip/det_manip_tutorial_cpp.rst:34: WARNING: Include file u'./det_manip_tutorial_3.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/det_manip/det_manip_tutorial_cpp.rst:39: WARNING: Include file u'./det_manip_tutorial_4.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/det_manip/det_manip_tutorial_cpp.rst:44: WARNING: Include file u'./det_manip_tutorial_5.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/det_manip/det_manip_tutorial_cpp.rst:49: WARNING: Include file u'./det_manip_tutorial_6.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/det_manip/det_manip_tutorial_cpp.rst:54: WARNING: Include file u'./det_manip_tutorial_7.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/det_manip/det_manip_tutorial_cpp.rst:59: WARNING: Include file u'./det_manip_tutorial_8.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/det_manip/det_manip_tutorial_cpp.rst:60: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/gfs_tutorial_cpp.rst:24: WARNING: Include file u'./gfs_tut_matsub_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/gfs_tutorial_cpp.rst:34: WARNING: Include file u'./gfs_tut_matsub_2.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/gfs_tutorial_cpp.rst:40: WARNING: Include file u'./gfs_tutorial_3.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/gfs_tutorial_cpp.rst:48: WARNING: Include file u'./gfs_tutorial_0.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/gfs_tutorial_cpp.rst:52: WARNING: Include file u'./gfs_tutorial_1.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/gfs_tutorial_cpp.rst:56: WARNING: Include file u'./gfs_tutorial_2.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/gfs_tutorial_cpp.rst:61: WARNING: Include file u'./gfs_tutorial_4.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/gfs_tutorial_cpp.rst:66: WARNING: Include file u'./gfs_tutorial_5.cpp' not found or reading it failed
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/gfs_tutorial_cpp.rst:73: WARNING: Include file u'./gfs_tutorial_6.cpp' not found or reading it failed
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/lattice_gfs_tutorial_python.rst:58: (WARNING/2) Exception occurred in plotting lattice_gfs
 from /Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/lattice_gfs.py:
Traceback (most recent call last):
  File "/Users/hugstr/dev/triqs/cbuild_test/doc/sphinxext/numpydoc/plot_directive.py", line 472, in run_code
    exec code in ns
  File "<string>", line 1, in <module>
ImportError: No module named multivar
WARNING: /Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/multivar_gfs_tutorial_python.rst:44: (WARNING/2) Exception occurred in plotting multivar
 from /Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/multivar.py:
Traceback (most recent call last):
  File "/Users/hugstr/dev/triqs/cbuild_test/doc/sphinxext/numpydoc/plot_directive.py", line 472, in run_code
    exec code in ns
  File "<string>", line 1, in <module>
ImportError: No module named multivar
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/hdf5/hdf5_tutorial_cpp.rst:9: WARNING: Include file u'./gf_imfreq_h5_rw.cpp' not found or reading it failed
looking for now-outdated files... none found
pickling environment... done
checking consistency... /Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/move_set.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/random_generator.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/random_generator_names.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/installation/requirements.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/arrays/h5_proxy.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/c++/mpi/mpi.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/cpp2py/wrap.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/fit_tail.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_misc.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_reinterpret.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/gf_subscript.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_freq_mesh.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/gfs/c++/matsubara_imtime.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hdf5/full_ref.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/hilbert_space/statevector_concept.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/reference/lattice_tools/tightbinding.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/tour/contents.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/gfs/gfs_tutorial.rst: WARNING: document isn't included in any toctree
/Users/hugstr/dev/triqs/cbuild_test/doc/tutorials/using_the_lib/profiling.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:179: WARNING: undefined label: det_manip_boost (if the link has no caption the label must precede a section header)
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:181: WARNING: undefined label: det_manip_h5_write (if the link has no caption the label must precede a section header)
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:183: WARNING: undefined label: det_manip_h5_read (if the link has no caption the label must precede a section header)
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:185: WARNING: undefined label: det_manip_swap (if the link has no caption the label must precede a section header)
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/det_manip/det_manip.rst:187: WARNING: undefined label: det_manip_foreach (if the link has no caption the label must precede a section header)
writing output... [ 13%] cpp2rst_generated/triqs/det_manip/det_manip/insert2_at_end .. cpp2rst_generatedwriting output... [ 20%] cpp2rst_generated/triqs/det_manip/det_manip/try_insert2 .. cpp2rst_generated/tr/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/mc_generic.rst:106: WARNING: undefined label: mc_generic_h5_write (if the link has no caption the label must precede a section header)
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/mc_generic.rst:108: WARNING: undefined label: mc_generic_h5_read (if the link has no caption the label must precede a section header)
writing output... [ 26%] cpp2rst_generated/triqs/mc_tools/mc_generic/get_warmup_time .. cpp2rst_generate/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/move_set.rst:61: WARNING: undefined label: move_set_h5_write (if the link has no caption the label must precede a section header)
/Users/hugstr/dev/triqs/cbuild_test/doc/cpp2rst_generated/triqs/mc_tools/move_set.rst:63: WARNING: undefined label: move_set_h5_read (if the link has no caption the label must precede a section header)
writing output... [ 33%] cpp2rst_generated/triqs/mc_tools/random_generator/name .. reference/arrays/Interop_Python
krivenko commented 6 years ago

Hi Hugo,

Sphinx 1.6.3 is broken, it fails in parallel mode.

https://github.com/sphinx-doc/sphinx/issues/4061#issue-258088990 https://github.com/TRIQS/cthyb/blob/ce3188a484abf8e7e46cff367e6951bde7768cda/doc/CMakeLists.txt#L16

I had to downgrade Sphinx to compile the cthyb docs.

parcollet commented 6 years ago

I have 1.6.4 here and it works

HugoStrand commented 6 years ago

I just bumped my version to 1.6.5 and the error is gone.

HugoStrand commented 6 years ago

Thank you all for helping out. <3