TRON-Bioinformatics / covigator

CoVigator - Monitoring SARS-CoV-2 mutations
MIT License
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123_cite_constellation #125

Closed johausmann closed 1 year ago

johausmann commented 1 year ago

This merge addresses the following issues issues

codecov[bot] commented 1 year ago

Codecov Report

Patch coverage: 42.85% and project coverage change: -0.03 :warning:

Comparison is base (dda7985) 85.62% compared to head (b43c0c2) 85.59%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## develop #125 +/- ## =========================================== - Coverage 85.62% 85.59% -0.03% =========================================== Files 48 48 Lines 4968 4965 -3 =========================================== - Hits 4254 4250 -4 - Misses 714 715 +1 ``` | [Impacted Files](https://app.codecov.io/gh/TRON-Bioinformatics/covigator/pull/125?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=TRON-Bioinformatics) | Coverage Δ | | |---|---|---| | [covigator/dashboard/tabs/recurrent\_mutations.py](https://app.codecov.io/gh/TRON-Bioinformatics/covigator/pull/125?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=TRON-Bioinformatics#diff-Y292aWdhdG9yL2Rhc2hib2FyZC90YWJzL3JlY3VycmVudF9tdXRhdGlvbnMucHk=) | `36.55% <0.00%> (ø)` | | | [covigator/database/queries.py](https://app.codecov.io/gh/TRON-Bioinformatics/covigator/pull/125?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=TRON-Bioinformatics#diff-Y292aWdhdG9yL2RhdGFiYXNlL3F1ZXJpZXMucHk=) | `73.46% <ø> (ø)` | | | [...igator/tests/unit\_tests/test\_lineage\_annotation.py](https://app.codecov.io/gh/TRON-Bioinformatics/covigator/pull/125?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=TRON-Bioinformatics#diff-Y292aWdhdG9yL3Rlc3RzL3VuaXRfdGVzdHMvdGVzdF9saW5lYWdlX2Fubm90YXRpb24ucHk=) | `100.00% <ø> (ø)` | | | [covigator/references/lineage\_annotation.py](https://app.codecov.io/gh/TRON-Bioinformatics/covigator/pull/125?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=TRON-Bioinformatics#diff-Y292aWdhdG9yL3JlZmVyZW5jZXMvbGluZWFnZV9hbm5vdGF0aW9uLnB5) | `99.46% <100.00%> (-0.01%)` | :arrow_down: | ... and [1 file with indirect coverage changes](https://app.codecov.io/gh/TRON-Bioinformatics/covigator/pull/125/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=TRON-Bioinformatics)

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