TRON-Bioinformatics / covigator

CoVigator - Monitoring SARS-CoV-2 mutations
MIT License
11 stars 1 forks source link

Some patches to the DB + a bugfix on a date #78

Closed priesgo closed 1 year ago

priesgo commented 1 year ago

Makes sure that Variant Observations table hold the collection date from the corresponding sample

codecov[bot] commented 1 year ago

Codecov Report

Base: 83.00% // Head: 83.00% // No change to project coverage :thumbsup:

Coverage data is based on head (3f301d7) compared to base (53fcae2). Patch has no changes to coverable lines.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## develop #78 +/- ## ======================================== Coverage 83.00% 83.00% ======================================== Files 46 46 Lines 4173 4173 ======================================== Hits 3464 3464 Misses 709 709 ``` | [Impacted Files](https://codecov.io/gh/TRON-Bioinformatics/covigator/pull/78?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=TRON-Bioinformatics) | Coverage Δ | | |---|---|---| | [covigator/pipeline/vcf\_loader.py](https://codecov.io/gh/TRON-Bioinformatics/covigator/pull/78?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=TRON-Bioinformatics#diff-Y292aWdhdG9yL3BpcGVsaW5lL3ZjZl9sb2FkZXIucHk=) | `94.82% <ø> (ø)` | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=TRON-Bioinformatics). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=TRON-Bioinformatics)

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