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TRON-Bioinformatics / neofox

Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors
GNU General Public License v3.0
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Update documentation to account for Apple Silicon users #10

Closed aromberg closed 1 year ago

aromberg commented 1 year ago

Hi all,

to save Apple Silicon users (like me!) some time, I think it would be great to add docker build --platform linux/amd64 --tag neofox-docker . to the installation page.

Getting NeoFox to run on M1 seem to be possible to some extend by using python:3.7 instead of python:3.7-slim (includes gcc) and installing cython before building and installing NeoFox. Unfortunately, the process still fails when running neofox-configure since netMHCpan-4.1 is missing arm binaries.

priesgo commented 1 year ago

Thanks for the feedback @aromberg this is now in develop branch ready for the next release