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TRON-Bioinformatics / neofox

Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors
GNU General Public License v3.0
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docs: mention that a log file with a fixed file name is always appended to #5

Closed dlaehnemann closed 1 year ago

dlaehnemann commented 1 year ago

This one tripped me up, as we are using our workflow management system (snakemake) to do the logging for us, but I also got these unexpected log files in the results directory. Also, I initially got confused by old error output before I realized that the log file is not cleared before writing new stuff. So it accumulates the logging output of multiple runs with the same data. As a minimal fix, this PR includes this info in the docs.

priesgo commented 1 year ago

Thanks @dlaehnemann, Just reported this one https://github.com/TRON-Bioinformatics/neofox/issues/7

dlaehnemann commented 1 year ago

Thanks @dlaehnemann, Just reported this one #7

Wasn't sure if this was intended behaviour in your usage setting, so I just added the info to the docs and didn't attempt a fix. But good to see this followed up, thanks!