Taiji-pipeline / Taiji

All-in-one analysis pipeline
https://taiji-pipeline.github.io/
BSD 3-Clause "New" or "Revised" License
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Differential expression and accessibility analysis #26

Open AntonioAhn opened 2 years ago

AntonioAhn commented 2 years ago

Hi Kai,

Could I please ask a question regarding if Taiji is able to work with differentially expressed (RNAseq, example DESeq2 results) and differentially accessible (ATAC-seq) files? If not, would there be a way to work around it? This would be control samples versus drug-treated samples type of analysis.

Cheers, Antonio