TalusBio / gopher

Gene ontology enrichment analysis using protein expression.
Apache License 2.0
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Make Gopher faster! #7

Closed wfondrie closed 2 years ago

wfondrie commented 2 years ago

As of now, gopher is much too slow to run on a full collection of GO terms in a reasonable amount of time.

Making gopher run faster will involve rewriting the statistical tests in Numba, enabling parallelization for testing the terms.