Improve subprocess handling and logging in patch.py

[CharlesCNorton]

This PR introduces improvements to the apply_patch method in patch.py, focusing on enhanced subprocess handling and logging. These changes aim to make the patch application process more transparent, maintainable, and easier to debug.

Key Changes:

• Simplification of the subprocess.run call for better readability and maintenance.
• Introduction of more detailed and informative logging for both successful and failed patch applications.

Justification with Respect to Principles

1. Readability: The subprocess call and logging statements have been restructured for better readability, making the code more accessible and easier to understand.
2. Beautiful is better than ugly: The code now has a cleaner and more organized structure, enhancing its aesthetic and functional quality.
3. Explicit is better than implicit: The changes include explicit handling of text encoding and more informative logging, making the subprocess behavior and outcomes clear.
4. Simple is better than complex: The update simplifies the execution flow and error handling, avoiding unnecessary complexities.
5. Complex is better than complicated: Where complexity is necessary (in detailed logging), it's managed in a straightforward and logical manner.
6. Flat is better than nested: The modifications maintain a flat and clear structure, avoiding deep nesting.
7. Sparse is better than dense: Information is presented clearly and concisely, particularly in logging, ensuring clarity without overwhelming detail.
8. Special cases aren't special enough to break the rules: The update treats all subprocess outcomes consistently, applying the same standards of logging and error handling.
9. Errors should never pass silently: Every error in the patch application process is now logged informatively, ensuring visibility and traceability.
10. In the face of ambiguity, refuse the temptation to guess: The detailed logging removes ambiguity about the subprocess outcomes.
11. There should be one — and preferably only one — obvious way to do it: The method for handling subprocess calls and logging is standardized, providing a clear and consistent approach.
12. Now is better than never: Proactive implementation of these improvements addresses potential future debugging and maintenance needs.

[CharlesCNorton]

failed build checks, investigating