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Teichlab / Genes2Genes

Aligning gene expression trajectories of single-cell reference and query systems
https://teichlab.github.io/Genes2Genes/
MIT License
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Import issue #6

Closed Dooo0k closed 1 month ago

Dooo0k commented 1 month ago

I keep encountering ModuleNotFoundError for the following imports: import Main import ClusterUtils import TimeSeriesPreprocessor import PathwayAnalyser import VisualUtils

The imports above, such as Main, are causing issues, while the ones at the top are working fine. I followed the installation steps exactly as described in the tutorial. How can I resolve this issue? Thank you.

dinithins commented 1 month ago

Hi @Dooo0k, Thanks for spotting this. Please modify the imports as below. 

from genes2genes import Main
from genes2genes import ClusterUtils
from genes2genes import TimeSeriesPreprocessor
from genes2genes import PathwayAnalyser
from genes2genes import VisualUtils

This has now been fixed in the tutorial notebook.

Dooo0k commented 1 month ago

Hi @dinithins , I sincerely appreciate your response.