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Pan_fetal_immune
Collection of scripts for analysis of pan fetal immune atlas
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Feedback from FCA annotation meeting 27/07/2021
#31
Closed
emdann
closed
2 years ago
emdann
commented
3 years ago
Plasma B cells: majority in spleen, also at early stages.
Could they suggest GC formation? Maybe not, as Kerstin points out that there are mechanisms for T cell independent formation
or could they be originating from B1?
Clarify/justify the rationale to keep the cycling clusters separated but present
NK origin:
Focus on NK trajectory analysis including DN cells
is the proportion of NK cells with DN-like TCR the same across developmental stages?
Should we rename PROMONOCYTE_PROLIFERATING differently?
Verify that organ specific clusters in myeloid, such as YS_MAC and BM_CD14_MONO are not driven solely by soup
Rename YS specific microglia subset from gene+ to gene_hi (can't squint hard enough to read the full gene name lol)