Closed emdann closed 2 years ago
From user feedback:
[x] Add sample metadata .csv with matching of VDJ libraries to RNA libraries
[x] Move BCR libraries in contig folders
[x] Fix assignment of image IDs in spatial objects .obs
.obs
[x] Add TCR/BCR contig data to the data portal https://cellgeni.cog.sanger.ac.uk/developmentcellatlas/fetal-immune/panfetal_BCR.tar.gz https://cellgeni.cog.sanger.ac.uk/developmentcellatlas/fetal-immune/panfetal_abTCR.tar.gz
[x] Make metadata .yaml for sfaira and store in metadata/
metadata/
[x] 5' v1 in main scRNA-seq libs, 5' v2 for ATO
[x] Add ALL data location info to README
To mp:
To dh:
From user feedback:
[x] Add sample metadata .csv with matching of VDJ libraries to RNA libraries
[x] Move BCR libraries in contig folders
[x] Fix assignment of image IDs in spatial objects
.obs
[x] Add TCR/BCR contig data to the data portal https://cellgeni.cog.sanger.ac.uk/developmentcellatlas/fetal-immune/panfetal_BCR.tar.gz https://cellgeni.cog.sanger.ac.uk/developmentcellatlas/fetal-immune/panfetal_abTCR.tar.gz
[x] Make metadata .yaml for sfaira and store in
metadata/
[x] 5' v1 in main scRNA-seq libs, 5' v2 for ATO
[x] Add ALL data location info to README