Teichlab / bbknn

Batch balanced KNN
MIT License
149 stars 25 forks source link

Query cells together #51

Closed ChuanXu1 closed 2 years ago

ChuanXu1 commented 2 years ago

May improve the tree query efficiency a bit by querying cells altogether

ktpolanski commented 2 years ago

Tested this out against pip's 1.5.1, using ckdtree. Got the same UMAP out at the end.

Will add some tweaks to other aspects and do 1.6.0.