Closed SabrinaITNL closed 4 years ago
Does bracer test
work on your docker image now?
If so, can you run on all your cells? It may be that the two you've tried just don't contain sequences that can be assembled.
M
On 29 Jan 2020, at 11:19, SabrinaITNL notifications@github.com wrote:
Hi, I am running Bracer on the docker image. I already tried two files and they both stop at the Trinity step with the following comment: Trinity run failed. Must investigate error above. Trinity failed for locus No successful Trinity assemblies
No recombinants found
Any idea on how can I solve this? Thanks! :) Sabrina
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Hi Mike, nope, also the test fails. Might it be because the memory allocated to the VM is too little? Which is the minimum amount required? Cheers Sabrina
Ah, yes. That could well be why. Can you try 6 or 8GB?
Mike
On 29 Jan 2020, at 12:22, SabrinaITNL notifications@github.com wrote:
Hi Mike, nope, also the test fails. Might it be because the memory allocated to the VM is too little? Which is the minimum amount required? Cheers Sabrina
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Hi, I am running Bracer on the docker image. I already tried two files and they both stop at the Trinity step with the following comment: Trinity run failed. Must investigate error above. Trinity failed for locus No successful Trinity assemblies
No recombinants found
Any idea on how can I solve this? Thanks! :) Sabrina