Analyze organ crosstalk using cellhint

Teichlab / cellhint

A tool for semi-automatic cell type harmonization and integration

MIT License

90 stars 11 forks source link

Analyze organ crosstalk using cellhint #6

Open jhylwq123 opened 3 months ago

jhylwq123 commented 3 months ago

Dear developers Thanks for posting this amazing tool and providing the open resources of multi-organ reference map in https://www.celltypist.org/organs. My question is if I want to analyze the cell-cell communications across organs, is it appropriate to download the two organs I am interested from this website and simply combine them to perform the analysis?

ChuanXu1 commented 3 months ago

@jhylwq123, yes, cell type names were already unified across organs.