Error: Result is empty - Githubissues

Teichlab / cellphonedb

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Error: Result is empty #127

Closed Matthias3033 closed 4 years ago

Matthias3033 commented 5 years ago

Hi, when I run the statistical analysis in cellphonedb, I get the following error message: Result is empty. My data comes from an anndata object out of scanpy. Many thanks in advance for your help.

Technical data: Windows 10 Python 3.6.8 Cellphonedb v.2.0.0

mvento commented 5 years ago

Hi @Matthias3033 can you send the input files?

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Matthias3033 commented 5 years ago

Hi @mvento,

here is an excerpt of my used data Data_cellphonedb.zip

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Matthias3033 commented 4 years ago

Hi @mvento,

I was able to solve the problem by converting the gen names to ens ids.

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ruohuchengxhe commented 4 years ago

Hi @mvento,

I was able to solve the problem by converting the gen names to ens ids.

Best

Hi Matthias! Good to know you converted gen names to ens ids. I was not able to do this. May I ask how did you convert them? Thanks you! Best