Teichlab / cellphonedb

MIT License
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plot problem #158

Closed millersan closed 4 years ago

millersan commented 4 years ago

Hi, I try to used the test file: "row.txt" "column.txt" to finished the dotplot. But it returns to this error. I wonder if you could help me with this

+++++++++++++++++++++++++++++++++++++++++++++++++ R[write to console]: Registered S3 methods overwritten by 'ggplot2': method from [.quosures rlang c.quosures rlang print.quosures rlang R[write to console]: Error in grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, : invalid font type R[write to console]: In addition: R[write to console]: There were 50 or more warnings (use warnings() to see the first 50) R[write to console]: [ ][APP][09/04/20-01:35:23][ERROR] R Runtime Exception: Error in grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, : invalid font type ++++++++++++++++++++++++++++++++++++++++++++++++++

here is my code ########################################################### cellphonedb plot dot_plot --pvalues-path=./out/pvalues.txt --means-path=./out/means.txt --output-path=./out --output-name=dotplot.pdf --rows ./in/example_data/rows.txt --columns ./in/example_data/columns.txt ###########################################################

thanks. bests, millersan

millersan commented 4 years ago

I finished the result from the "cellphonedb/cellphonedb/src/plotters/R/plot_dot_by_columnname.R" ^^

mief commented 4 years ago

Hi, Was the problem with the font? We put 'Arial' by default, but we will change this. Thanks, Mirjana