Teichlab / cellphonedb

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--subsampling-log parameter for CPM normalized data #227

Open J-Keding opened 3 years ago

J-Keding commented 3 years ago

Hello, thanks for your great software! Could you please clarify whether to set the --subsampling-log parameter in the _method statisticalanalysis as true or false when using CMP normalized data? I found the following descriptions of the parameter:

Does it mean that CPM normalized data have to be log-transformed for subsampling, thus I should set the parameter as true?

Thanks!