Teichlab / cellphonedb

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significant means file - duplicate interaction id #254

Open onahman opened 3 years ago

onahman commented 3 years ago

Hi, I ran statistical analysis on my data and I was going over the output file "significant_means.csv". I noticed I have some rows with the same id_cp_interaction field. If I look on the fields that describe the interaction they are all the same. The rank however is different. I can't figure why the same interaction should appear twice. Is there a reason or it's a bug?

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gloriafight commented 3 years ago

I noticed that, too. I think it's because some of genes have different ENSEMBL_ID. image

gloriafight commented 3 years ago

According to the script in plot_heatmaps.R, the duplicate interaction id was removed. image