How to use environment.yaml install CellphoneDB environment in conda

[yuyzw]

How to use environment.yaml install CellphoneDB environment in conda ?

[prete]

Hi @yuyzw! You can use this environment.yml (you'll need to rename it from environment.yml.txt to environment.yml because GitHub does not allow yml files to be attached)

Then, to create the environment use conda env create -f environment.yml

Finally use conda activate cpdb to activate your environment and you'll have all that you need to run your analysis.