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Teichlab / celltypist

A tool for semi-automatic cell type classification
https://www.celltypist.org/
MIT License
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Details to be added about the available model #37

Closed saeedfc closed 1 year ago

saeedfc commented 1 year ago

Dear,

In the description of the model it is not clear whether the model involves cells from both healthy and CD or just healthy? I am especially referring to 'Cells_Intestinal_Tract ' from intestinal cells from fetal, pediatric and adult human gut (134 cell types). The original study associated also has CD data. Hence the confusion.

Kindly clarify.

ChuanXu1 commented 1 year ago

@saeedfc, good point! The 'Cells_Intestinal_Tract' indeed contains pediatric CD cells. Will clarify this in the model details.

ChuanXu1 commented 1 year ago

@saeedfc, the model details have been updated.

https://www.celltypist.org/models

https://github.com/Teichlab/celltypist_wiki/blob/main/json/models.json#L56

ChuanXu1 commented 1 year ago

This issue should be solved. Please let me know if you still need more details for the model.